The Fresno County District Attorney's Office has filed one count of conspiracy to commit firearms trafficking and one count of possession of an assault weapon against Hunter.
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If convicted of the charges and allegations, Hunter faces a maximum sentence of three years and eight months.
Hunter was arrested again last Friday by the Fresno Police Department on similar weapon-related charges.
RELATED: Former Fresno State men's basketball guard Joseph Hunter back in police custody
Police say on the night of May 16, they found a loaded AR-15 style weapon in the rear passenger seat of the vehicle.
When police pulled over the vehicle, Hunter and two other men jumped out and ran from the car. They were later arrested.
RELATED: Fresno State men's basketball guard Joseph Hunter arrested on weapon charges
Coming out of San Joaquin Memorial, Hunter was a four-star recruit and even named the Mountain West preseason Freshman of the Year.
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After Friday's arrest, Fresno State dismissed him from the men's basketball program.
Due to a pre-season injury, Hunter never saw a minute on the basketball court for the Bulldogs
Stay with ABC30 for the latest details on this developing story.
The video above is from an earlier story and will be updated.